Transcript: ENST00000478914.1 XRCC6-008

Description

X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:HGNC Symbol;Acc:4055]

Gene Synonyms

CTC75, CTCBF, D22S671, D22S731, G22P1, KU70, ML8, TLAA

Location

Chromosome 22: 42,052,957-42,057,703 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2159 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSG00000196419.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359308.4	XRCC6-003	2709	609aa	ENSP00000352257.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14021	F5H1I8 P12956	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360079.3	XRCC6-001	2296	609aa	ENSP00000353192.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14021	F5H1I8 P12956	NM_001469.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405878.1	XRCC6-006	2200	609aa	ENSP00000384257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14021	F5H1I8 P12956	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402580.3	XRCC6-002	1998	568aa	ENSP00000384941.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHC8 F5H1I8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428575.2	XRCC6-201	1995	476aa	ENSP00000403679.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1I8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405506.1	XRCC6-005	1958	559aa	ENSP00000384082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHC9 F5H1I8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478914.1	XRCC6-008	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464116.1	XRCC6-007	359	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 550 bps,

Version

ENST00000478914.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321719 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000478914.1 XRCC6-008

Summary