Transcript: ENST00000355968.6 PPIA-002

Description

peptidylprolyl isomerase A (cyclophilin A) [Source:HGNC Symbol;Acc:9253]

Gene Synonyms

CYPA, CYPH, HEL-S-69p

Location

Chromosome 7: 44,836,280-44,841,230 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 2904 variant alleles and maps to 760 oligo probes.

Gene

This transcript is a product of gene ENSG00000196262.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000468812.1	PPIA-001	2238	165aa	ENSP00000419425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5494	C9J5S7 F8WE65 P62937 Q567Q0	NM_021130.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489459.1	PPIA-003	907	105aa	ENSP00000427976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q567Q0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355968.6	PPIA-002	818	105aa	ENSP00000430817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q567Q0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451562.1	PPIA-006	544	121aa	ENSP00000405975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J5S7 F8WE65	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415933.1	PPIA-007	863	120aa	ENSP00000394670.1	Nonsense mediated decay		F8WE65	-	-
ENST00000479021.1	PPIA-009	552	58aa	ENSP00000429251.1	Nonsense mediated decay		E5RIZ5	-	-
ENST00000480603.1	PPIA-008	842	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494484.1	PPIA-004	2149	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481437.1	PPIA-005	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 818 bps, Translation length: 105 residues

Version

ENST00000355968.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000341783 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000355968.6 PPIA-002

Summary