Transcript: ENST00000355430.4 COLCA1-002

Description

colorectal cancer associated 1 [Source:HGNC Symbol;Acc:33789]

Gene Synonyms

C11orf92, CASC12, FLJ45803

Location

About this transcript

This transcript has 2 exons, is annotated with 1 domain and feature, is associated with 3106 variant alleles and maps to 428 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000532918.1	COLCA1-001	5496	124aa	ENSP00000437253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6ZS62	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355430.4	COLCA1-002	5442	124aa	ENSP00000347601.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6ZS62	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540738.1	COLCA1-201	375	124aa	ENSP00000438980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6ZS62	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526150.1	COLCA1-003	391	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 5,442 bps, Translation length: 124 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZS62

Version

ENST00000355430.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000391000 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.