Transcript: ENST00000368714.1 S100A4-006

Description

S100 calcium binding protein A4 [Source:HGNC Symbol;Acc:10494]

Gene Synonyms

18A2, 42A, CAPL, FSP1, MTS1, P9KA, PEL98

Location

Chromosome 1: 153,516,097-153,522,612 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 2991 variant alleles and maps to 255 oligo probes.

Gene

This transcript is a product of gene ENSG00000196154.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368716.4	S100A4-001	600	101aa	ENSP00000357705.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1042	P26447	NM_002961.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368715.1	S100A4-003	573	101aa	ENSP00000357704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1042	P26447	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354332.4	S100A4-002	566	101aa	ENSP00000346294.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1042	P26447	NM_019554.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368714.1	S100A4-006	531	101aa	ENSP00000357703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1042	P26447	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481009.1	S100A4-004	755	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468373.1	S100A4-005	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 531 bps, Translation length: 101 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P26447

CCDS

This transcript is a member of the Human CCDS set: CCDS1042

Version

ENST00000368714.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000084607 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000368714.1 S100A4-006

Summary