Transcript: ENST00000380554.3 AKR1C3-001

Description

aldo-keto reductase family 1, member C3 [Source:HGNC Symbol;Acc:386]

Gene Synonyms

DD3, DDH1, DDX, HA1753, HAKRB, HAKRe, HSD17B5, KIAA0119, PGFS, hluPGFS

Location

Chromosome 10: 5,135,985-5,149,878 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 14 domains and features, is associated with 8839 variant alleles and maps to 496 oligo probes.

Gene

This transcript is a product of gene ENSG00000196139.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380554.3	AKR1C3-001	1807	323aa	ENSP00000369927.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7063	B4DL37 P42330	NM_003739.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000605149.1	AKR1C3-006	1405	300aa	ENSP00000474882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DL37 S4R3D5 S4R3Z2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439082.2	AKR1C3-201	1262	204aa	ENSP00000401327.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DL37	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602997.1	AKR1C3-008	636	155aa	ENSP00000474188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3D5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470862.2	AKR1C3-002	996	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000605781.1	AKR1C3-007	859	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480822.1	AKR1C3-003	795	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480697.2	AKR1C3-004	1026	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000605322.1	AKR1C3-005	846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000603484.1	AKR1C3-010	629	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000603312.1	AKR1C3-009	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,807 bps, Translation length: 323 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P42330

CCDS

This transcript is a member of the Human CCDS set: CCDS7063

Version

ENST00000380554.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000046533 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000380554.3 AKR1C3-001

Summary