Transcript: ENST00000236147.4 SELL-001

Description

selectin L [Source:HGNC Symbol;Acc:10720]

Gene Synonyms

CD62L, LAM-1, LAM1, LECAM1, LEU8, LNHR, LSEL, LYAM1, Leu-8, Lyam-1, PLNHR, TQ1, hLHRc

Location

About this transcript

This transcript has 9 exons, is annotated with 32 domains and features, is associated with 8988 variant alleles and maps to 527 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000236147.4	SELL-001	2436	385aa	ENSP00000236147.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53427	P14151 Q6ULR8	NM_000655.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463108.1	SELL-002	1346	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479657.1	SELL-003	701	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466340.1	SELL-004	619	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460650.1	SELL-006	522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497295.1	SELL-005	216	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,436 bps, Translation length: 385 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P14151

CCDS

This transcript is a member of the Human CCDS set: CCDS53427

Version

ENST00000236147.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000084233 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.