Transcript: ENST00000497857.1 RUFY4-004

Description

RUN and FYVE domain containing 4 [Source:HGNC Symbol;Acc:24804]

Gene Synonyms

FLJ46536

Location

Chromosome 2: 218,899,683-218,933,572 forward strand.

About this transcript

This transcript has 3 exons, is associated with 14485 variant alleles and maps to 216 oligo probes.

Gene

This transcript is a product of gene ENSG00000188282.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000374155.3	RUFY4-002	2977	607aa	ENSP00000363270.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9J235	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344321.7	RUFY4-201	2760	571aa	ENSP00000345900.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6ZNE9	NM_198483.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441828.2	RUFY4-202	2653	172aa	ENSP00000388839.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6ZNE9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457754.2	RUFY4-001	3568	172aa	ENSP00000410091.2	Nonsense mediated decay	Q6ZNE9	-	-
ENST00000463872.1	RUFY4-009	787	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000465568.1	RUFY4-007	709	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000497857.1	RUFY4-004	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000480164.1	RUFY4-003	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000463618.2	RUFY4-006	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000472496.1	RUFY4-005	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000495721.1	RUFY4-008	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 571 bps,

Version

ENST00000497857.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338930 (version 1)

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Transcript: ENST00000497857.1 RUFY4-004

Summary