Transcript: ENST00000375111.3 PLA2G2A-001

Description

phospholipase A2, group IIA (platelets, synovial fluid) [Source:HGNC Symbol;Acc:9031]

Gene Synonyms

MOM1, PLA2, PLA2B, PLA2L, PLA2S, PLAS1, RASF-A, sPLA2

Location

Chromosome 1: 20,301,931-20,306,909 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 2369 variant alleles and maps to 378 oligo probes.

Gene

This transcript is a product of gene ENSG00000188257.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375111.3	PLA2G2A-001	970	144aa	ENSP00000364252.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS201	P14555	NM_001161727.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400520.3	PLA2G2A-201	888	144aa	ENSP00000383364.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS201	P14555	NM_001161729.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496748.1	PLA2G2A-002	1306	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491964.1	PLA2G2A-003	903	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469162.1	PLA2G2A-005	867	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482011.1	PLA2G2A-004	735	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461140.1	PLA2G2A-006	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 970 bps, Translation length: 144 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P14555

CCDS

This transcript is a member of the Human CCDS set: CCDS201

Version

ENST00000375111.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000007675 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000375111.3 PLA2G2A-001

Summary