Transcript: ENST00000405239.1 DAZ1-001

Description

deleted in azoospermia 1 [Source:HGNC Symbol;Acc:2682]

Gene Synonyms

DAZ, SPGY, pDP1680, pDP1681

Location

Chromosome Y: 25,275,502-25,345,241 reverse strand.

About this transcript

This transcript has 28 exons, is annotated with 25 domains and features, is associated with 470 variant alleles and maps to 2555 oligo probes.

Gene

This transcript is a product of gene ENSG00000188120.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000405239.1	DAZ1-001	4421	744aa	ENSP00000384573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48209	E7EU38 Q6S4N0 Q9NQZ3	NM_004081.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426000.2	DAZ1-202	3821	579aa	ENSP00000400716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EU38 Q6S4N0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540248.1	DAZ1-203	3268	390aa	ENSP00000444407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6S8J2 Q6S4N0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382510.4	DAZ1-201	2382	613aa	ENSP00000371950.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q1RMF9 Q6S4N0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466332.1	DAZ1-002	2242	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 27, Transcript length: 4,421 bps, Translation length: 744 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQZ3

CCDS

This transcript is a member of the Human CCDS set: CCDS48209

Version

ENST00000405239.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000102473 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000405239.1 DAZ1-001

Summary