Transcript: ENST00000475405.2 TET3-005

Description

tet methylcytosine dioxygenase 3 [Source:HGNC Symbol;Acc:28313]

Gene Synonyms

AC073046.25, KIAA0401, MGC22014, hCG_40738

Location

About this transcript

This transcript has 2 exons, is associated with 12742 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409262.3	TET3-001	10983	1660aa	ENSP00000386869.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46339	K9JJH7 O43151	NM_144993.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000305799.7	TET3-004	2280	738aa	ENSP00000307803.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KNF3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475405.2	TET3-005	1608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,608 bps,

Version

ENST00000475405.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397455 (version 1)