Transcript: ENST00000467182.1 COL4A1-004

Description

collagen, type IV, alpha 1 [Source:HGNC Symbol;Acc:2202]

Gene Synonyms

HANAC, ICH, POREN1, arresten

Location

About this transcript

This transcript has 3 exons, is associated with 1150 variant alleles and maps to 70 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375820.4	COL4A1-001	6524	1669aa	ENSP00000364979.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9511	A9LSU1 P02462	NM_001845.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543140.1	COL4A1-201	2547	519aa	ENSP00000443348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5K0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467182.1	COL4A1-004	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474391.1	COL4A1-003	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 593 bps,

Version

ENST00000467182.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000312867 (version 1)