Transcript: ENST00000560965.1 CHP1-004

Description

calcineurin-like EF-hand protein 1 [Source:HGNC Symbol;Acc:17433]

Gene Synonyms

CHP, SLC9A1BP, Sid470p, p22, p24

Location

Chromosome 15: 41,549,108-41,564,573 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 6593 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSG00000187446.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334660.5	CHP1-001	3284	195aa	ENSP00000335632.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10073	Q99653	NM_007236.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560397.1	CHP1-006	568	154aa	ENSP00000454007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNG9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560965.1	CHP1-004	467	91aa	ENSP00000453392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560411.1	CHP1-003	1088	53aa	ENSP00000453375.1	Nonsense mediated decay		H0YLX1	-	-
ENST00000392151.2	CHP1-002	1000	128aa	ENSP00000440490.1	Nonsense mediated decay		F5GX29	-	-
ENST00000560784.1	CHP1-008	717	123aa	ENSP00000452772.1	Nonsense mediated decay		H0YKE7	-	-
ENST00000558351.1	CHP1-009	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560633.1	CHP1-005	594	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561280.1	CHP1-007	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 467 bps, Translation length: 91 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000560965.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000419056 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000560965.1 CHP1-004

Summary