Transcript: ENST00000381539.3 NPSR1-007

Description

neuropeptide S receptor 1 [Source:HGNC Symbol;Acc:23631]

Gene Synonyms

ASRT2, GPR154, GPRA, NPSR, PGR14, VRR1

Location

Chromosome 7: 34,698,021-34,889,280 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 28 domains and features, is associated with 82477 variant alleles and maps to 324 oligo probes.

Gene

This transcript is a product of gene ENSG00000187258.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359791.1	NPSR1-002	1410	377aa	ENSP00000352839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5443	Q6W5P4	NM_207173.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360581.1	NPSR1-001	1567	371aa	ENSP00000353788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5444	Q6W5P4	NM_207172.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531252.1	NPSR1-009	1377	366aa	ENSP00000433258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6W5P4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381542.1	NPSR1-004	1369	305aa	ENSP00000370953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6W5P4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381539.3	NPSR1-007	1233	390aa	ENSP00000370950.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6W5P4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381553.3	NPSR1-006	856	143aa	ENSP00000370965.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6W5P4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465305.1	NPSR1-008	814	94aa	ENSP00000434955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6W5P4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396095.2	NPSR1-003	1473	136aa	ENSP00000379402.2	Nonsense mediated decay		Q6W5P4	-	-
ENST00000381544.2	NPSR1-005	1463	158aa	ENSP00000370955.2	Nonsense mediated decay		Q6W5P4	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,233 bps, Translation length: 390 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6W5P4

Version

ENST00000381539.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs10275028, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) ESP6500:African_American, CSHL-HAPMAP:HAPMAP-LWK, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HAPMAP-CHD, ESP6500:European_American, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-ASW.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000329036 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381539.3 NPSR1-007

Summary