Transcript: ENST00000484359.1 CCK-004

Description

cholecystokinin [Source:HGNC Symbol;Acc:1569]

Location

About this transcript

This transcript has 2 exons, is associated with 791 variant alleles and maps to 153 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396169.2	CCK-002	1527	115aa	ENSP00000379472.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2696	P06307 Q6FG82	NM_000729.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334681.5	CCK-001	830	115aa	ENSP00000335657.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2696	P06307 Q6FG82	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434608.1	CCK-003	747	115aa	ENSP00000409124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2696	P06307 Q6FG82	NM_001174138.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484359.1	CCK-004	718	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 718 bps,

Version

ENST00000484359.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000343382 (version 1)