Transcript: ENST00000335312.3 PIP5K1C-001

Description

phosphatidylinositol-4-phosphate 5-kinase, type I, gamma [Source:HGNC Symbol;Acc:8996]

Gene Synonyms

KIAA0589, LCCS3, PIP5K-GAMMA, PIP5Kgamma, PIPKIg_v4

Location

Chromosome 19: 3,630,181-3,700,477 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 13 domains and features, is associated with 41015 variant alleles and maps to 590 oligo probes.

Gene

This transcript is a product of gene ENSG00000186111.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335312.3	PIP5K1C-001	5080	668aa	ENSP00000335333.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32872	O60331 Q7LE22	NM_012398.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537021.1	PIP5K1C-005	3326	700aa	ENSP00000444779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O60331 Q7LE22	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589578.1	PIP5K1C-003	2933	707aa	ENSP00000466363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O60331 Q7LE22	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539785.1	PIP5K1C-002	2289	640aa	ENSP00000445992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56074	O60331 Q7LE22	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587482.1	PIP5K1C-004	1311	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592530.1	PIP5K1C-006	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 5,080 bps, Translation length: 668 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60331

CCDS

This transcript is a member of the Human CCDS set: CCDS32872

Version

ENST00000335312.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000453432 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000335312.3 PIP5K1C-001

Summary