Transcript: ENST00000334636.5 CYP2R1-001

Description

cytochrome P450, family 2, subfamily R, polypeptide 1 [Source:HGNC Symbol;Acc:20580]

Location

Chromosome 11: 14,899,608-14,913,798 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 22 domains and features, is associated with 6428 variant alleles and maps to 285 oligo probes.

Gene

This transcript is a product of gene ENSG00000186104.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334636.5	CYP2R1-001	1613	501aa	ENSP00000334592.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7818	Q6VVX0	NM_024514.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532378.1	CYP2R1-003	1746	268aa	ENSP00000435484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532805.1	CYP2R1-005	2325	37aa	ENSP00000465097.1	Nonsense mediated decay		E9PS56	-	-
ENST00000530609.1	CYP2R1-004	1882	37aa	ENSP00000466060.1	Nonsense mediated decay		E9PS56	-	-
ENST00000534686.1	CYP2R1-002	1668	37aa	ENSP00000432087.2	Nonsense mediated decay		E9PS56	-	-
ENST00000525015.1	CYP2R1-006	446	32aa	ENSP00000466604.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526489.1	CYP2R1-009	876	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526276.1	CYP2R1-008	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532641.1	CYP2R1-010	634	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529043.1	CYP2R1-007	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,613 bps, Translation length: 501 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6VVX0

CCDS

This transcript is a member of the Human CCDS set: CCDS7818

Version

ENST00000334636.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000386985 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000334636.5 CYP2R1-001

Summary