Transcript: ENST00000371839.1 AGBL4-001

Description

ATP/GTP binding protein-like 4 [Source:HGNC Symbol;Acc:25892]

Gene Synonyms

CCP6, FLJ14442

Location

Chromosome 1: 48,998,527-50,489,585 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 5 domains and features, is associated with 610619 variant alleles and maps to 459 oligo probes.

Gene

This transcript is a product of gene ENSG00000186094.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371839.1	AGBL4-001	2947	503aa	ENSP00000360905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44137	Q5VU57	NM_032785.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416121.1	AGBL4-002	3938	299aa	ENSP00000401622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0AVJ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000371836.1	AGBL4-003	1454	217aa	ENSP00000360902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1ANV5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371838.1	AGBL4-004	1353	320aa	ENSP00000360904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMW3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334103.7	AGBL4-201	932	227aa	ENSP00000335516.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DGK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497451.1	AGBL4-005	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,947 bps, Translation length: 503 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VU57

CCDS

This transcript is a member of the Human CCDS set: CCDS44137

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000371839.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000021346 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000371839.1 AGBL4-001

Summary