Transcript: ENST00000382489.3 HTR3D-001

Description

5-hydroxytryptamine (serotonin) receptor 3D, ionotropic [Source:HGNC Symbol;Acc:24004]

Gene Synonyms

5HT3D

Location

Chromosome 3: 183,750,619-183,757,072 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 3178 variant alleles and maps to 258 oligo probes.

Gene

This transcript is a product of gene ENSG00000186090.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382489.3	HTR3D-001	1674	454aa	ENSP00000371929.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54685	Q70Z44	NM_001163646.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334128.2	HTR3D-002	1459	279aa	ENSP00000334315.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3249	F6WC43	NM_182537.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428798.2	HTR3D-004	1215	404aa	ENSP00000405409.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46966	Q70Z44	NM_001145143.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453435.1	HTR3D-003	1043	233aa	ENSP00000389268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q70Z44	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,674 bps, Translation length: 454 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q70Z44

CCDS

This transcript is a member of the Human CCDS set: CCDS54685

Version

ENST00000382489.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000346289 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000382489.3 HTR3D-001

Summary