Transcript: ENST00000340020.6 AIDA-001

Description

axin interactor, dorsalization associated [Source:HGNC Symbol;Acc:25761]

Gene Synonyms

C1orf80, FLJ12806, RP11-378J18.7

Location

Chromosome 1: 222,841,355-222,885,866 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 7 domains and features, is associated with 18455 variant alleles and maps to 756 oligo probes.

Gene

This transcript is a product of gene ENSG00000186063.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340020.6	AIDA-001	3008	306aa	ENSP00000339161.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1533	Q96BJ3	NM_022831.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355727.2	AIDA-003	1875	224aa	ENSP00000347964.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96BJ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541237.1	AIDA-201	1568	282aa	ENSP00000442882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H715	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474863.1	AIDA-002	4050	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470437.1	AIDA-005	880	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495670.1	AIDA-006	837	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497112.1	AIDA-004	717	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,008 bps, Translation length: 306 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96BJ3

CCDS

This transcript is a member of the Human CCDS set: CCDS1533

Version

ENST00000340020.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000091818 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000340020.6 AIDA-001

Summary