Transcript: ENST00000440596.2 HTR3E-007

Description

5-hydroxytryptamine (serotonin) receptor 3E, ionotropic [Source:HGNC Symbol;Acc:24005]

Gene Synonyms

5-HT3-E, 5-HT3E, 5-HT3c1

Location

Chromosome 3: 183,818,161-183,824,481 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 3289 variant alleles and maps to 350 oligo probes.

Gene

This transcript is a product of gene ENSG00000186038.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000440596.2	HTR3E-007	1449	482aa	ENSP00000406050.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58871	A5X5Y0	NM_001256614.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415389.2	HTR3E-003	2139	456aa	ENSP00000401444.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58868	A5X5Y0 C9J420	NM_198313.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335304.2	HTR3E-001	1912	471aa	ENSP00000335511.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3251	A5X5Y0 C9J420	NM_198314.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436361.2	HTR3E-004	1371	456aa	ENSP00000395833.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58870	A5X5Y0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425359.2	HTR3E-002	1326	441aa	ENSP00000401900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58869	A5X5Y0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431041.1	HTR3E-006	705	158aa	ENSP00000391254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J420	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,449 bps, Translation length: 482 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A5X5Y0

CCDS

This transcript is a member of the Human CCDS set: CCDS58871

Version

ENST00000440596.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346288 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000440596.2 HTR3E-007

Summary