Transcript: ENST00000334060.3 SHOX-201

Description

short stature homeobox [Source:HGNC Symbol;Acc:10853]

Gene Synonyms

GCFX, PHOG, SHOXY, SS

Location

Chromosome X: 585,079-620,146 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 24671 variant alleles and maps to 409 oligo probes.

Gene

This transcript is a product of gene ENSG00000185960.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381578.1	SHOX-202	3757	292aa	ENSP00000370990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14107	O15266	NM_000451.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334060.3	SHOX-201	1951	225aa	ENSP00000335505.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14106	O15266	NM_006883.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554971.1	SHOX-003	1902	292aa	ENSP00000452016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14107	O15266	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381575.1	SHOX-001	1351	225aa	ENSP00000370987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14106	O15266	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,951 bps, Translation length: 225 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15266

CCDS

This transcript is a member of the Human CCDS set: CCDS14106

Version

ENST00000334060.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000334060.3 SHOX-201

Summary