Transcript: ENST00000551969.1 SP1-003

Description

Sp1 transcription factor [Source:HGNC Symbol;Acc:11205]

Gene Synonyms

TSFP1

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 1760 variant alleles and maps to 97 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327443.4	SP1-001	2846	785aa	ENSP00000329357.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8857	C4PGM0 G5E9M8 H3BVI2 P08047 Q9NR52	NM_138473.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426431.2	SP1-002	7603	778aa	ENSP00000404263.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44898	C4PGM0 G5E9M8 H3BVI2	NM_003109.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548560.1	SP1-004	1061	230aa	ENSP00000458133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BVI2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551969.1	SP1-003	602	162aa	ENSP00000457804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUU5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 602 bps, Translation length: 162 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000551969.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407043 (version 2)