Transcript: ENST00000453705.1 BRCC3-005

Description

BRCA1/BRCA2-containing complex, subunit 3 [Source:HGNC Symbol;Acc:24185]

Gene Synonyms

BRCC36, C6.1A, CXorf53

Location

Chromosome X: 154,299,807-154,351,311 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 4 domains and features, is associated with 14205 variant alleles and maps to 567 oligo probes.

Gene

This transcript is a product of gene ENSG00000185515.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369462.1	BRCC3-001	2846	316aa	ENSP00000358474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56611	P46736	NM_024332.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369459.2	BRCC3-004	2641	247aa	ENSP00000358471.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P46736	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330045.7	BRCC3-002	2496	291aa	ENSP00000328641.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56612	P46736	NM_001242640.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340647.4	BRCC3-006	1101	292aa	ENSP00000344103.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56610	P46736	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399042.1	BRCC3-201	954	317aa	ENSP00000381998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H9KVA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411985.1	BRCC3-007	688	226aa	ENSP00000413170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000399026.1	BRCC3-003	456	90aa	ENSP00000381988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000453705.1	BRCC3-005	2694	85aa	ENSP00000415152.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 3, Transcript length: 2,694 bps, Translation length: 85 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000453705.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316163 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000453705.1 BRCC3-005

Summary