Transcript: ENST00000423350.1 TCN2-004

Description

transcobalamin II [Source:HGNC Symbol;Acc:11653]

Gene Synonyms

D22S676, D22S750, II, TC, TC II, TC-2, TC2, TCII

Location

Chromosome 22: 31,002,990-31,007,101 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 2457 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSG00000185339.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215838.3	TCN2-001	2535	427aa	ENSP00000215838.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13881	P20062	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405742.3	TCN2-002	1936	423aa	ENSP00000385914.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MBX2	NM_000355.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407817.3	TCN2-003	1870	400aa	ENSP00000384914.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54519	P20062	NM_001184726.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423350.1	TCN2-004	637	102aa	ENSP00000411529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6W9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000450638.1	TCN2-005	2159	29aa	ENSP00000394184.1	Nonsense mediated decay		F8WE86	-	-
ENST00000493542.1	TCN2-007	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471659.1	TCN2-006	484	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 637 bps, Translation length: 102 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000423350.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321285 (version 1)

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Transcript: ENST00000423350.1 TCN2-004

Summary