Transcript: ENST00000492049.1 SFTPA2-006

Description

surfactant protein A2 [Source:HGNC Symbol;Acc:10799]

Gene Synonyms

COLEC5, PSAP, PSP-A, PSPA, SFTP1, SFTPA, SFTPA2B, SP-A, SP-A2, SPA2, SPAII

Location

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 695 variant alleles and maps to 407 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372325.2	SFTPA2-001	2189	248aa	ENSP00000361400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41540	B7Z4Y4 Q8IWL1 R4GMN3	NM_001098668.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372327.5	SFTPA2-201	1425	248aa	ENSP00000361402.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41540	B7Z4Y4 Q8IWL1 R4GMN3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417041.1	SFTPA2-003	726	158aa	ENSP00000397375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMN3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000492049.1	SFTPA2-006	644	97aa	ENSP00000473275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMN3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 644 bps, Translation length: 97 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000492049.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048966 (version 2)