Transcript: ENST00000331079.6 PRMT3-001

Description

protein arginine methyltransferase 3 [Source:HGNC Symbol;Acc:30163]

Gene Synonyms

HRMT1L3

Location

About this transcript

This transcript has 16 exons, is annotated with 14 domains and features, is associated with 53287 variant alleles and maps to 590 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000331079.6	PRMT3-001	2653	531aa	ENSP00000331879.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7853	O60678	NM_005788.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437750.2	PRMT3-003	1736	469aa	ENSP00000397766.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44554	O60678	NM_001145166.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330796.5	PRMT3-002	2530	46aa	ENSP00000329586.5	Nonsense mediated decay		E9PLF6	-	-
ENST00000525188.1	PRMT3-006	681	46aa	ENSP00000435151.1	Nonsense mediated decay		E9PLF6	-	-
ENST00000526583.1	PRMT3-005	532	54aa	ENSP00000434260.1	Nonsense mediated decay		E9PRB4	-	-
ENST00000529592.1	PRMT3-004	4159	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,653 bps, Translation length: 531 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60678

CCDS

This transcript is a member of the Human CCDS set: CCDS7853

Version

ENST00000331079.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000387489 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.