Transcript: ENST00000551991.1 NDUFA12-005

Description

NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Source:HGNC Symbol;Acc:23987]

Gene Synonyms

B17.2, DAP13

Location

Chromosome 12: 95,365,109-95,397,384 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 13544 variant alleles and maps to 237 oligo probes.

Gene

This transcript is a product of gene ENSG00000184752.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327772.2	NDUFA12-001	635	145aa	ENSP00000330737.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9050	Q9UI09	NM_018838.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547986.1	NDUFA12-002	487	63aa	ENSP00000450130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58263	Q9UI09	NM_001258338.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547157.1	NDUFA12-003	276	55aa	ENSP00000448846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VXI1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552205.1	NDUFA12-004	813	54aa	ENSP00000449144.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000546788.1	NDUFA12-009	563	99aa	ENSP00000448545.1	Nonsense mediated decay		F8VRD8	-	-
ENST00000551991.1	NDUFA12-005	546	47aa	ENSP00000450096.1	Nonsense mediated decay		H0YIT1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000550187.1	NDUFA12-007	517	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547447.1	NDUFA12-008	491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538372.2	NDUFA12-006	472	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 546 bps, Translation length: 47 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000551991.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407534 (version 1)

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Transcript: ENST00000551991.1 NDUFA12-005

Summary