Transcript: ENST00000572154.1 CLDN6-002

Description

claudin 6 [Source:HGNC Symbol;Acc:2048]

Location

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 2099 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396925.1	CLDN6-001	1739	220aa	ENSP00000380131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10488	P56747	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000328796.4	CLDN6-201	1369	220aa	ENSP00000328674.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10488	P56747	NM_021195.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572154.1	CLDN6-002	461	39aa	ENSP00000458783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1E7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 461 bps, Translation length: 39 residues

Version

ENST00000572154.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000436962 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.