Transcript: ENST00000587578.1 SOCS3-002

Description

suppressor of cytokine signaling 3 [Source:HGNC Symbol;Acc:19391]

Gene Synonyms

ATOD4, CIS3, Cish3, SOCS-3, SSI-3, SSI3

Location

About this transcript

This transcript has 2 exons, is associated with 545 variant alleles and maps to 204 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330871.2	SOCS3-001	2729	225aa	ENSP00000330341.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11756	O14543 Q6FI39	NM_003955.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587578.1	SOCS3-002	361	15aa	ENSP00000464727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 361 bps, Translation length: 15 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000587578.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000438457 (version 1)