Transcript: ENST00000488658.1 PROS1-005

Description

protein S (alpha) [Source:HGNC Symbol;Acc:9456]

Gene Synonyms

PROS, PS21, PS22, PS23, PS24, PS25, PSA, THPH5, THPH6

Location

Chromosome 3: 93,624,884-93,630,001 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2249 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000184500.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394236.3	PROS1-001	3556	676aa	ENSP00000377783.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2923	B4E1L6 C9K0R0 G5E9F8 P07225 Q06F35 Q6J1N0 Q8IXD2 Q8IXD4 Q8IXD5	NM_000313.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407433.1	PROS1-002	3335	545aa	ENSP00000385794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E1L6 C9K0R0 G5E9F8 Q06F35 Q8IXD2 Q8IXD4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348974.4	PROS1-003	806	231aa	ENSP00000330021.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K0R0 H7BXT0 Q6J1N0 Q8IXD5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000472684.1	PROS1-004	562	56aa	ENSP00000419616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K0R0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488658.1	PROS1-005	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 643 bps,

Version

ENST00000488658.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352897 (version 1)

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Transcript: ENST00000488658.1 PROS1-005

Summary