Transcript: ENST00000550824.1 POU6F1-003

Description

POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:9224]

Gene Synonyms

BRN5, MPOU, TCFB1

Location

Chromosome 12: 51,582,945-51,590,818 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 21 domains and features, is associated with 3407 variant alleles and maps to 451 oligo probes.

Gene

This transcript is a product of gene ENSG00000184271.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389243.4	POU6F1-001	5157	301aa	ENSP00000373895.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31803	F8VSI9 Q14863	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000333640.10	POU6F1-002	2474	301aa	ENSP00000330190.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31803	F8VSI9 Q14863	NM_002702.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550824.1	POU6F1-003	2183	301aa	ENSP00000448389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31803	F8VSI9 Q14863	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547855.1	POU6F1-007	207	29aa	ENSP00000448266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VSI9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547854.1	POU6F1-005	678	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000549309.1	POU6F1-004	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552305.1	POU6F1-008	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000548692.1	POU6F1-009	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546685.1	POU6F1-006	364	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,183 bps, Translation length: 301 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14863

CCDS

This transcript is a member of the Human CCDS set: CCDS31803

Version

ENST00000550824.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000405128 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000550824.1 POU6F1-003

Summary