Transcript: ENST00000454786.1 UBE2F-002

Description

ubiquitin-conjugating enzyme E2F (putative) [Source:HGNC Symbol;Acc:12480]

Gene Synonyms

NCE2

Location

Chromosome 2: 238,875,717-238,950,380 forward strand.

About this transcript

This transcript has 12 exons, is associated with 31443 variant alleles and maps to 710 oligo probes.

Gene

This transcript is a product of gene ENSG00000184182.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272930.4	UBE2F-001	2009	185aa	ENSP00000272930.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2523	C9J9P8 Q969M7	NM_080678.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414443.1	UBE2F-201	1555	153aa	ENSP00000399183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63177	C9JF62 Q969M7	NM_001278307.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409332.1	UBE2F-004	1138	163aa	ENSP00000387060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZ93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409953.1	UBE2F-020	924	161aa	ENSP00000386680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63175	H9KVB9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409633.1	UBE2F-011	837	164aa	ENSP00000387299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63176	C9J212	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434655.1	UBE2F-017	648	171aa	ENSP00000406113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9P8	NM_001278305.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448502.1	UBE2F-009	561	142aa	ENSP00000396003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416292.1	UBE2F-010	552	139aa	ENSP00000390813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JF62	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000434137.2	UBE2F-023	472	153aa	ENSP00000414619.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSK8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454786.1	UBE2F-002	1292	47aa	ENSP00000408676.1	Nonsense mediated decay		F2Z363	-	-
ENST00000441728.2	UBE2F-007	1242	102aa	ENSP00000409749.2	Nonsense mediated decay		Q969M7	-	-
ENST00000417231.1	UBE2F-013	984	47aa	ENSP00000408823.1	Nonsense mediated decay		F2Z363	-	-
ENST00000439338.1	UBE2F-019	873	63aa	ENSP00000410345.1	Nonsense mediated decay		G5E9R6	-	-
ENST00000445676.1	UBE2F-014	831	78aa	ENSP00000396296.1	Nonsense mediated decay		F8WCT3	-	-
ENST00000440223.1	UBE2F-006	830	48aa	ENSP00000412965.1	Nonsense mediated decay		F8WFB7	-	-
ENST00000433241.1	UBE2F-016	803	120aa	ENSP00000393515.1	Nonsense mediated decay		Q969M7	-	-
ENST00000455999.1	UBE2F-012	760	101aa	ENSP00000389685.1	Nonsense mediated decay		F8WDQ9	-	-
ENST00000433568.1	UBE2F-008	574	86aa	ENSP00000410867.1	Nonsense mediated decay		F8WB39	-	-
ENST00000439780.1	UBE2F-018	571	123aa	ENSP00000396630.1	Nonsense mediated decay		F8WD80	-	-
ENST00000472479.1	UBE2F-003	1458	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480828.1	UBE2F-021	802	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482096.1	UBE2F-022	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 2, Transcript length: 1,292 bps, Translation length: 47 residues

Version

ENST00000454786.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000328673 (version 1)

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Transcript: ENST00000454786.1 UBE2F-002

Summary