Transcript: ENST00000330817.6 ALG12-001

Description

ALG12, alpha-1,6-mannosyltransferase [Source:HGNC Symbol;Acc:19358]

Gene Synonyms

CDG1G, ECM39, PP14673, hALG12

Location

About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 10770 variant alleles and maps to 546 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330817.6	ALG12-001	5350	488aa	ENSP00000333813.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14081	Q9BV10	NM_024105.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486602.1	ALG12-003	674	205aa	ENSP00000420630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000492791.1	ALG12-002	753	196aa	ENSP00000417387.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 5,350 bps, Translation length: 488 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BV10

CCDS

This transcript is a member of the Human CCDS set: CCDS14081

Version

ENST00000330817.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000317405 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.