Transcript: ENST00000603338.2 TSHZ2-002

Description

teashirt zinc finger homeobox 2 [Source:HGNC Symbol;Acc:13010]

Gene Synonyms

C20orf17, OVC10-2, TSH2, ZABC2, ZNF218

Location

About this transcript

This transcript has 3 exons, is annotated with 23 domains and features, is associated with 134943 variant alleles and maps to 282 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371497.5	TSHZ2-001	12187	1034aa	ENSP00000360552.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33490	Q9NRE2 S4R3C8	NM_173485.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000603338.2	TSHZ2-002	3803	1031aa	ENSP00000475114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54474	Q9NRE2 S4R3C8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000329613.6	TSHZ2-201	3456	1031aa	ENSP00000333114.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54474	Q9NRE2 S4R3C8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000605656.2	TSHZ2-004	980	194aa	ENSP00000474159.2	Nonsense mediated decay		S4R3C8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,803 bps, Translation length: 1,031 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NRE2

CCDS

This transcript is a member of the Human CCDS set: CCDS54474

Version

ENST00000603338.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000259177 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.