Transcript: ENST00000560850.1 MRPS11-009

Description

mitochondrial ribosomal protein S11 [Source:HGNC Symbol;Acc:14050]

Gene Synonyms

FLJ22512, FLJ23406, HCC-2, RPMS11

Location

Chromosome 15: 89,010,939-89,015,851 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2261 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSG00000181991.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325844.4	MRPS11-001	1862	194aa	ENSP00000317376.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10342	P82912	NM_022839.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353598.6	MRPS11-002	766	161aa	ENSP00000318054.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10343	P82912	NM_176805.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560708.1	MRPS11-004	1060	118aa	ENSP00000453116.1	Nonsense mediated decay		H0YL99	-	-
ENST00000557974.1	MRPS11-007	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559323.1	MRPS11-008	2002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558406.1	MRPS11-010	918	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558548.1	MRPS11-006	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561262.1	MRPS11-003	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560850.1	MRPS11-009	458	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559125.1	MRPS11-011	453	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559557.1	MRPS11-005	447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 458 bps,

Version

ENST00000560850.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415438 (version 1)

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Transcript: ENST00000560850.1 MRPS11-009

Summary