Transcript: ENST00000369864.4 AMIGO1-001

Description

adhesion molecule with Ig-like domain 1 [Source:HGNC Symbol;Acc:20824]

Gene Synonyms

ALI2, AMIGO, AMIGO-1, KIAA1163

Location

About this transcript

This transcript has 2 exons, is annotated with 31 domains and features, is associated with 2242 variant alleles and maps to 296 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369864.4	AMIGO1-001	5088	493aa	ENSP00000358880.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30795	Q86WK6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369862.1	AMIGO1-002	2229	493aa	ENSP00000358878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30795	Q86WK6	NM_020703.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 5,088 bps, Translation length: 493 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86WK6

CCDS

This transcript is a member of the Human CCDS set: CCDS30795

Version

ENST00000369864.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000032247 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.