Transcript: ENST00000474615.1 OXTR-003

Description

oxytocin receptor [Source:HGNC Symbol;Acc:8529]

Gene Synonyms

OT-R

Location

About this transcript

This transcript has 2 exons, is associated with 625 variant alleles and maps to 132 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316793.3	OXTR-001	4364	389aa	ENSP00000324270.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2570	B2R9L7 C9JN09 C9JQC4 P30559	NM_000916.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431493.1	OXTR-002	743	43aa	ENSP00000414828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQC4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449615.1	OXTR-004	600	92aa	ENSP00000389587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JN09 C9JQC4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474615.1	OXTR-003	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 532 bps,

Version

ENST00000474615.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000314041 (version 1)