Transcript: ENST00000316793.3 OXTR-001

Description

oxytocin receptor [Source:HGNC Symbol;Acc:8529]

Gene Synonyms

OT-R

Location

About this transcript

This transcript has 4 exons, is annotated with 41 domains and features, is associated with 8909 variant alleles and maps to 351 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316793.3	OXTR-001	4364	389aa	ENSP00000324270.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2570	B2R9L7 C9JN09 C9JQC4 P30559	NM_000916.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431493.1	OXTR-002	743	43aa	ENSP00000414828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQC4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449615.1	OXTR-004	600	92aa	ENSP00000389587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JN09 C9JQC4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474615.1	OXTR-003	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 4,364 bps, Translation length: 389 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P30559

CCDS

This transcript is a member of the Human CCDS set: CCDS2570

Version

ENST00000316793.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207061 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.