Transcript: ENST00000509829.1 ARSJ-003

Description

arylsulfatase family, member J [Source:HGNC Symbol;Acc:26286]

Gene Synonyms

FLJ23548

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 31345 variant alleles and maps to 439 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315366.7	ARSJ-001	4657	599aa	ENSP00000320219.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43264	D6RGC1 Q5FYB0	NM_024590.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541197.1	ARSJ-201	2114	596aa	ENSP00000438836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGC1 Q5FYB0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509829.1	ARSJ-003	2253	133aa	ENSP00000421327.1	Nonsense mediated decay		D6RGC1	-	-
ENST00000503013.2	ARSJ-002	1551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 2,253 bps, Translation length: 133 residues

Version

ENST00000509829.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000363652 (version 1)