Transcript: ENST00000326652.4 TMEM150B-001

Description

transmembrane protein 150B [Source:HGNC Symbol;Acc:34415]

Gene Synonyms

TMEM224

Location

Chromosome 19: 55,824,169-55,836,669 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 6080 variant alleles and maps to 285 oligo probes.

Gene

This transcript is a product of gene ENSG00000180061.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326652.4	TMEM150B-001	943	233aa	ENSP00000320757.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42629	A6NC51 K7EKL2 K7EM00	NM_001282011.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438693.1	TMEM150B-201	875	233aa	ENSP00000412658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42629	A6NC51 K7EKL2 K7EM00	NM_001085488.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591570.1	TMEM150B-004	576	134aa	ENSP00000466297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM00	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000585918.1	TMEM150B-006	457	152aa	ENSP00000465672.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKL2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000586609.1	TMEM150B-003	878	63aa	ENSP00000466957.1	Nonsense mediated decay		K7ENI3	-	-
ENST00000592603.1	TMEM150B-002	830	63aa	ENSP00000468745.1	Nonsense mediated decay		K7ENI3	-	-
ENST00000592731.1	TMEM150B-005	519	84aa	ENSP00000465815.1	Nonsense mediated decay		K7EKW5	-	-
ENST00000592891.1	TMEM150B-007	1197	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 943 bps, Translation length: 233 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6NC51

CCDS

This transcript is a member of the Human CCDS set: CCDS42629

Version

ENST00000326652.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452685 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000326652.4 TMEM150B-001

Summary