Transcript: ENST00000496079.1 PSTK-007

Description

phosphoseryl-tRNA kinase [Source:HGNC Symbol;Acc:28578]

Gene Synonyms

C10orf89, MGC35392

Location

Chromosome 10: 124,742,806-124,754,445 forward strand.

About this transcript

This transcript has 5 exons, is associated with 4808 variant alleles and maps to 221 oligo probes.

Gene

This transcript is a product of gene ENSG00000179988.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368887.3	PSTK-001	1705	348aa	ENSP00000357882.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7633	Q8IV42	NM_153336.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405485.1	PSTK-201	2197	289aa	ENSP00000384764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406217.2	PSTK-002	1098	359aa	ENSP00000384653.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000497219.1	PSTK-004	2210	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496079.1	PSTK-007	872	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465232.1	PSTK-006	818	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483455.1	PSTK-005	696	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483755.1	PSTK-008	602	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493461.1	PSTK-003	3538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 872 bps,

Version

ENST00000496079.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050817 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000496079.1 PSTK-007

Summary