Transcript: ENST00000484308.1 PIPOX-014

Description

pipecolic acid oxidase [Source:HGNC Symbol;Acc:17804]

Gene Synonyms

LPIPOX, PSO

Location

Chromosome 17: 27,373,658-27,383,243 forward strand.

About this transcript

This transcript has 7 exons, is associated with 3903 variant alleles and maps to 287 oligo probes.

Gene

This transcript is a product of gene ENSG00000179761.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323372.4	PIPOX-001	2410	390aa	ENSP00000317721.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11248	K7EJU8 K7EK30 Q9P0Z9	NM_016518.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469082.1	PIPOX-002	760	204aa	ENSP00000465329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJU8 K7EK30	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000466889.1	PIPOX-015	720	153aa	ENSP00000465428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK30	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000583215.1	PIPOX-013	1829	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000580241.1	PIPOX-011	1772	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484308.1	PIPOX-014	1038	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578748.2	PIPOX-010	790	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577182.1	PIPOX-003	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000580383.1	PIPOX-012	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000419875.2	PIPOX-006	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,038 bps,

Version

ENST00000484308.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000255956 (version 1)

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Transcript: ENST00000484308.1 PIPOX-014

Summary