Transcript: ENST00000578516.1 CDC42EP4-005

Description

CDC42 effector protein (Rho GTPase binding) 4 [Source:HGNC Symbol;Acc:17147]

Gene Synonyms

BORG4, CEP4, KAIA1777, MGC17125, MGC3740

Location

Chromosome 17: 71,307,193-71,308,144 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 545 variant alleles and maps to 42 oligo probes.

Gene

This transcript is a product of gene ENSG00000179604.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335793.3	CDC42EP4-001	3272	356aa	ENSP00000338258.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11695	B2R6D8 J3KRZ9 J3QQS6 Q9H3Q1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439510.2	CDC42EP4-003	2879	286aa	ENSP00000404270.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KUS7	NM_012121.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580315.1	CDC42EP4-006	1022	127aa	ENSP00000462231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRZ9 J3QQS6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000581014.1	CDC42EP4-009	737	79aa	ENSP00000464104.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QR93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579611.1	CDC42EP4-004	580	73aa	ENSP00000463877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQS6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582303.1	CDC42EP4-008	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578516.1	CDC42EP4-005	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581045.1	CDC42EP4-007	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 572 bps,

Version

ENST00000578516.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441905 (version 1)

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Transcript: ENST00000578516.1 CDC42EP4-005

Summary