Transcript: ENST00000339582.2 GRM8-001

Description

glutamate receptor, metabotropic 8 [Source:HGNC Symbol;Acc:4600]

Gene Synonyms

GLUR8, GPRC1H, MGLUR8, mGlu8

Location

Chromosome 7: 126,078,652-126,893,348 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 45 domains and features, is associated with 342596 variant alleles and maps to 696 oligo probes.

Gene

This transcript is a product of gene ENSG00000179603.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000339582.2	GRM8-001	4057	908aa	ENSP00000344173.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5794	C9J7I1 E7ETK3 O00222	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358373.3	GRM8-002	3850	908aa	ENSP00000351142.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47696	C9J7I1 E7ETK3 O00222	NM_001127323.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444921.2	GRM8-202	3559	908aa	ENSP00000409790.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5794	C9J7I1 E7ETK3 O00222	NM_000845.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405249.1	GRM8-201	1506	501aa	ENSP00000385731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7I1 E7ETK3 O00222	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457830.1	GRM8-012	1247	293aa	ENSP00000415522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7I1 E7ETK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412160.1	GRM8-011	551	20aa	ENSP00000398012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7I1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465844.1	GRM8-006	429	91aa	ENSP00000418255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4V5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472701.1	GRM8-014	3650	908aa	ENSP00000419832.1	Nonsense mediated decay	CCDS47696	C9J7I1 E7ETK3 O00222	-	-
ENST00000341617.3	GRM8-003	3240	501aa	ENSP00000345747.3	Nonsense mediated decay		C9J7I1 E7ETK3 O00222	-	-
ENST00000480995.1	GRM8-004	1878	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489939.1	GRM8-007	910	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000448250.2	GRM8-009	843	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495315.1	GRM8-008	831	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473254.1	GRM8-005	647	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465800.1	GRM8-013	477	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000423518.1	GRM8-015	365	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 4,057 bps, Translation length: 908 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00222

CCDS

This transcript is a member of the Human CCDS set: CCDS5794

Version

ENST00000339582.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000059209 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000339582.2 GRM8-001

Summary