Transcript: ENST00000316052.5 EXOSC4-001

Description

exosome component 4 [Source:HGNC Symbol;Acc:18189]

Gene Synonyms

FLJ20591, RRP41, RRP41A, Rrp41p, SKI6, Ski6p, hRrp41p, p12A

Location

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 1211 variant alleles and maps to 367 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316052.5	EXOSC4-001	887	245aa	ENSP00000315476.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6414	Q9NPD3	NM_019037.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527954.1	EXOSC4-003	1065	261aa	ENSP00000436539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525936.1	EXOSC4-002	606	156aa	ENSP00000432661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPI9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 887 bps, Translation length: 245 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NPD3

CCDS

This transcript is a member of the Human CCDS set: CCDS6414

Version

ENST00000316052.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000384065 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.