Transcript: ENST00000461173.1 DHFRL1-003

Description

dihydrofolate reductase-like 1 [Source:HGNC Symbol;Acc:27309]

Gene Synonyms

DHFRP4, FLJ16119

Location

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 1911 variant alleles and maps to 373 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394221.2	DHFRL1-001	4038	187aa	ENSP00000377768.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2926	C9JJ68 Q86XF0	NM_001195643.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000314636.2	DHFRL1-002	3927	187aa	ENSP00000319170.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2926	C9JJ68 Q86XF0	NM_176815.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496983.1	DHFRL1-004	591	114aa	ENSP00000420810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJ68	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461173.1	DHFRL1-003	1831	187aa	ENSP00000418415.1	Nonsense mediated decay	CCDS2926	C9JJ68 Q86XF0	-	-
ENST00000481631.1	DHFRL1-005	632	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 1,831 bps, Translation length: 187 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86XF0

CCDS

This transcript is a member of the Human CCDS set: CCDS2926

Version

ENST00000461173.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000352912 (version 1)