Transcript: ENST00000382224.1 LCORL-002

Description

ligand dependent nuclear receptor corepressor-like [Source:HGNC Symbol;Acc:30776]

Gene Synonyms

FLJ30696, MLR1

Location

Chromosome 4: 17,882,218-18,022,357 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 60073 variant alleles and maps to 342 oligo probes.

Gene

This transcript is a product of gene ENSG00000178177.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382226.5	LCORL-201	5009	602aa	ENSP00000371661.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54749	C9JI46 Q8N3X6	NM_001166139.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326877.4	LCORL-001	5604	318aa	ENSP00000317566.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3425	Q8N3X6	NM_153686.7	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382224.1	LCORL-002	4984	518aa	ENSP00000371659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JI46	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539056.1	LCORL-202	1013	144aa	ENSP00000444394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510451.1	LCORL-004	1013	79aa	ENSP00000423489.1	Nonsense mediated decay		D6RA10	-	-
ENST00000512376.2	LCORL-005	500	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510121.1	LCORL-003	486	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 4,984 bps, Translation length: 518 residues

Version

ENST00000382224.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000250374 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000382224.1 LCORL-002

Summary