Transcript: ENST00000321679.4 THAP4-010

Description

THAP domain containing 4 [Source:HGNC Symbol;Acc:23187]

Gene Synonyms

CGI-36, PP238

Location

Chromosome 2: 242,523,835-242,541,585 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 9031 variant alleles and maps to 189 oligo probes.

Gene

This transcript is a product of gene ENSG00000176946.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000407315.1	THAP4-001	2367	577aa	ENSP00000385006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2551	Q8WY91	NM_015963.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402545.1	THAP4-006	833	192aa	ENSP00000384352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402136.1	THAP4-003	785	165aa	ENSP00000385931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54440	Q8WY91	NM_001164356.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497486.1	THAP4-009	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000321679.4	THAP4-010	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 581 bps,

Version

ENST00000321679.4

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000323052 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000321679.4 THAP4-010

Summary