Transcript: ENST00000323646.5 PLA2G16-001

Description

phospholipase A2, group XVI [Source:HGNC Symbol;Acc:17825]

Gene Synonyms

AdPLA, H-REV107-1, HRASLS3, HREV107, HREV107-1, HREV107-3, HRSL3, MGC118754.

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 17483 variant alleles and maps to 471 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323646.5	PLA2G16-001	2594	162aa	ENSP00000320337.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8047	F5H7E5 P53816	NM_007069.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415826.1	PLA2G16-201	1099	162aa	ENSP00000389124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8047	F5H7E5 P53816	NM_001128203.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540943.1	PLA2G16-003	243	27aa	ENSP00000442576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7E5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000394613.3	PLA2G16-002	678	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544269.1	PLA2G16-004	430	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,594 bps, Translation length: 162 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P53816

CCDS

This transcript is a member of the Human CCDS set: CCDS8047

Version

ENST00000323646.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000396632 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.