Transcript: ENST00000567564.1 CCDC101-004

Description

coiled-coil domain containing 101 [Source:HGNC Symbol;Acc:25156]

Gene Synonyms

FLJ32446, SGF29, STAF36

Location

Chromosome 16: 28,565,293-28,601,762 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 3 domains and features, is associated with 16795 variant alleles and maps to 334 oligo probes.

Gene

This transcript is a product of gene ENSG00000176476.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317058.3	CCDC101-001	1153	293aa	ENSP00000316114.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10635	Q96ES7	NM_138414.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564023.1	CCDC101-007	354	90aa	ENSP00000454730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567564.1	CCDC101-004	788	132aa	ENSP00000455370.1	Nonsense mediated decay		H3BPL5	-	-
ENST00000564682.1	CCDC101-002	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569581.1	CCDC101-003	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567447.1	CCDC101-005	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000565945.1	CCDC101-006	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 788 bps, Translation length: 132 residues

Version

ENST00000567564.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000430978 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000567564.1 CCDC101-004

Summary